NIH Proteomics Interest Group

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ProtIG is an NIH Special Interest Group (SIG) that organizes seminars and workshops in relevant areas of proteomics, including talks on separation and protein identification methods, determination of post-translational modifications, protein-protein interactions, and bioinformatics and data management. A monthly seminar series is held in the Building 50 1st floor conference room at 10am usually on the first Friday of each month (always check the Mtgs/Seminars button on this page for these and other PROTIG announced meetings). To receive email announcements of ProtIG events, join the listserv (Join the SIG button on this page)
ProtIG Seminar
December 10, 2009
10am - 11am
Building 50, NIH Campus
1st Floor Auditorium
Suzanne Gaudet, Ph.D.
Dana-Farber Cancer Institute,
Harvard Medical School


"Putting numbers on the network: variability in ligand-induced cell death"

n certain contexts, different cellular responses arise from variations in protein expression levels or activity. Using single- cell measurements and computational models, we recently showed how variability in protein expression levels is responsible for cell-to- cell variability in the timing of apoptosis in TRAIL-treated cells. Still, predicting cellular phenotypes is challenging when multiple proteins and complex dynamics are involved. Here I will present an approach, based on Lyapunov analysis of differential equation models, which allows us to compute phase diagrams mapping predicted cellular phenotypes to different concentrations of regulatory proteins. We validated this approach experimentally, identifying key determinants for whether cells require, or not, mitochondrial outer membrane permeabilization during cell death induced by TNF superfamily ligands (Type II vs. I phenotypes).


Seminars will be webcast online at http://videocast.nih.gov/ and available on the
Proteomics Interest Group website http://proteome.nih.gov as an archived presentation unless otherwise noted.


Please join us for this months Fellows Forum Seminar on the 19th of November.See the Fellows Forum for more information.

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This site was updated on November 18, 2009. Please contact Renee Olano at olanol(at)mail.nih.gov with questions or suggestions.